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Reaction Systems Models for the Self-Assembly of Intermediate Filaments

Sepinoud Azimi, Charmi Panchal, Eugen Czeizler, Ion Petre, Reaction Systems Models for the Self-Assembly of Intermediate Filaments. TUCS Technical Reports 1131, TUCS, 2015.

Abstract:

Reaction systems are a recent addition to the spectrum of computational modeling frameworks. We construct in this paper several reaction systems models for the
self-assembly of vimentin tetramers into intermediate filaments. We demonstrate that reaction systems are a versatile modeling framework, able to capture several
aspects of the dynamics of the self-assembly of intermediate filaments using only simple, set-theoretical-based concepts.

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BibTeX entry:

@TECHREPORT{tAzPaCzPe15a,
  title = {Reaction Systems Models for the Self-Assembly of Intermediate Filaments},
  author = {Azimi, Sepinoud and Panchal, Charmi and Czeizler, Eugen and Petre, Ion},
  number = {1131},
  series = {TUCS Technical Reports},
  publisher = {TUCS},
  year = {2015},
  keywords = {Reaction systems; modeling; intermediate filaments; self-assembly.},
  ISBN = {978-952-12-3187-2},
}

Belongs to TUCS Research Unit(s): Computational Biomodeling Laboratory (Combio Lab)

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